Molecular Docking, Vibrational, Structural and Electronic Studies of 5- (4-Butoxybenzylidene)-2-[3-(4-Chlorophenyl)-5[4-(Propan-2-Yl)-4,5-
Dihydro-1H-Pyrazol-1-Yl]-1,3-Thiazol-4(5H)-One
K.Venila, A.Lakshmia , V. Balachandranb
a Department of Physics, Government Arts College (Affiliated to Bharathidasan University), Trichy 621 222, TN, India.
bCentre for Research, Department of Physics, Arignar Anna Government Arts College, Musiri ,621 211, TN, India
Abstract
Spectroscopic and structural investigations of 5-(4-Butoxybenzylidene)-2-[3-(4-chlorophenyl)-5[4- (propan-2-yl)-4, 5-dihydro-1H-pyrazol-1-yl]-1,3-thiazol-4(5H)-one are presented by using experimental (FT-IR and FT-Raman) spectra and theoretical (Density functional theory) calculations.
The optimized geometrical assignments were made on the basis of potential energy distribution. The molecular electrostatic potential map was used to detect the electrophilic and nucleophilic sites in the molecule. The directly calculated ionization potential (I), electron affinity (A), electronegativity (), electrophilic index (), hardness () and chemical potential (µ) are all correlated from HOMO- LUMO energies with their molecular properties. The reduced density gradient of the title molecule was investigated by the interaction of molecule. Molecular docking studies were also described.
Keywords:DFT, Thiazole, Reduced Density Gradient and Docking.
1. Introduction
Thiazoleis a heterocyclic compound that contains both sulphur and nitrogen and a large family of derivatives. Thiazole itself is a pale yellow liquid with a pyridine-like odor and they have extensive applications in agriculture and medicinal chemistry [1, 2]. Varieties of biologically active molecules accommodate the thiazole and its derivatives, aminothiazoles [3]. They are used as important fragments in different drugs related to anti-tuberculosis, anti-inflammatory, [4, 5, 6], anti-allergic [7], anti-hypertensive [8], schizophrenia [9], anti-bacterial, HIV infections [4, 10] and human
lymphatic filarial parasites [11]. Various thiazole derivatives are used as fungicides and herbicides and have numerous applications in agricultural field [12]. Hydantoin derivatives, in particular phenytoin, are important antiepileptic drugs.
In the present work, optimized molecular structure of the title compound is investigated. The vibrational spectroscopic investigations combined with DFT (Density functional theory)calculations are employed to provide comprehensive vibrational spectral assignments of the title compound. The molecular properties like dipole moment, polarizability, hyper polarizability and molecular electrostatic potential surface have been calculated to get a better understanding the properties of the title molecule.The non-covalent interactions like hydrogen bonding and Van der Waals interaction were identified from the molecular geometry and electron localization function. These interactions in molecules have been studied by using reduced density gradient (RDG) and graphed by Multiwfn.Molecular docking is a computer-assisted drug design (CADD) method used to predict the favourable orientation of a ligand (viz. drug) to a target (viz. receptor) when bound to each other to form a stable complex.
2. Experimental details
5-(4-Butoxybenzylidene)-2-[3-(4-chlorophenyl)-5[4-(propan-2-yl)-4, 5-dihydro-1H-pyrazol-1-yl]- 1,3-thiazol-4(5H)-one was synthesized as per the reported procedure [13-15]. The Fourier Transform infrared (FT-IR) spectrum of the title compound was recorded using Perkin Elmer Spectrometer fitted with a KBr beam splitter around 4000-450 cm-1. The Bruker RFS 27 FT-Raman spectrometer in the region 4000-0 cm-1 using a 1064 nm Nd:YAG laser source was used to reported the FT- Raman spectrum. Both the spectral measurements were performed at the Sophisticated Analytical Instrumentation Facility (SAIF), IIT, Madras, India.
3. Computational details
All calculations of the title compound were carried out using Gaussian 09 program [16] was performed with Becke’s three-parameter hybrid model and therefore the Lee-Yang-Parr correlation was a useful functional (B3LYP) in DFT [17, 18] technique. The electronic structure of the molecule has to be proven with the density functional theory. The visual representations for fundamental modes are also checked by the Gauss view program [19]. Electron density map and reduced density
gradient (RDG) were calculated with the use of Multiwfn program [20] and plotted by visual molecule dynamics program (VMD) [21]. The reactivity descriptors, such as electrophilicity (ω), global hardness (η), the chemical potential (µ), ionization potential (I) and electron affinity (A) were determined from the energies of frontier molecular orbitals. The molecular docking calculation was performed by the AutoDock 4.0.1 software [22], which was also applied to detect the docking input files and analyze the docking result. Using Discovery studio visualize software, one of the best active site was visualized for ligand-protein interaction.
4.0 Results and discussions
4.1 Optimized molecular geometrical parameters
The geometrical structure and parameters of 5-(4-Butoxybenzylidene)-2-[3-(4-chlorophenyl)-5[4- (propan-2-yl)-4,5-dihydro-1H-pyrazol-1-yl]-1,3-thiazol-4(5H)-one are depicted in Figure 1 and Table 1 by using B3LYP/6-31G and B3LYP/6-31G (d,p) methods.
Figure 1: Optimized molecular structure of 5-(4-Propan-2-yl)benzylidene)-2-[3-(4- chlorophenyl)-5[4-(propan-2-yl)phenyl-4,5-dihydro-1H-pyrazol-1-yl]-1,3-thiazol-4(5H)-one
Table 1: Optimized structural parameters of 5-(4-Butoxybenzylidene)-2-[3-(4- chlorophenyl)-5[4-(propan-2-yl)-4,5-dihydro-1H-pyrazol-1-yl]-1,3-thiazol-4(5H)-one
obtained by B3LYP/6-31G and B3LYP/6-31G (d,p) basis sets.
Parameters
Bond length (Å)
Parameters
Bond angle(°)
Parameters
Dihedral angle(°) B3LYP/6-
31G
B3LYP/6- 31G(D,P)
B3LYP/6- 31G
B3LYP/6- 31G(d,p)
B3LYP/6- 31G
B3LYP/6- 31G(D,P)
C1-C4 1.4604 1.4628 C4-C1-N24 121.7147 121.788
N24-C1-C4-
C5 179.171 178.663
C1-N24 1.3062 1.294 C4-C1-C26 125.171 125.091
N24-C1-C4-
C6 -0.574 -1.023
C1-C26 1.5223 1.5184
N24-C1-
C26 113.104 113.11
C26-C1-C4-
C5 0.425 -0.056
C1-C14 1.5184 1.5174
C14-C2-
N25 112.3446 112.421
C26-C1-C4-
C6 -179.319 -179.743
C2-N25 1.5078 1.4931
C14-C2-
C26 115.1468 114.938
C4-C1-N24-
N25 -179.833 179.898
C2-C26 1.5576 1.5519
C14-C2-
N25 109.2771 109.088
C26-C1-
N24-N25 -0.948 -1.241
C2-H55 1.0919 1.0919
N25-C2-
C26 100.1893 100.201
C4-C1-N26-
C2 -174.604 -174.939
H3-C26 1.0937 1.0932
N25-C2-
H55 107.2673 107.668
C4-C1-C26-
H3 -54.509 -54.804
C4-C5 1.4082 1.4042
C26-C2-
H55 121.7147 121.788
C4-C1-C26-
H28 65.533 65.160
C4-C6 1.4121 1.4083 C1-C4-C5 125.171 125.091
N24-C1-
C26-C2 6.557 6.245
C5-C7 1.3979 1.3933 C1-C4-C6 113.104 113.11
N24-C1-
C26-H3 126.652 126.379
C5-C8 1.0844 1.0852 C5-C4-C6 112.3446 112.421
N24-C1-
C26-H28 -113.306 -113.657
C6-C9 1.3932 1.3882 C4-C5-C7 115.1468 114.9386
N25-C2-
C14-C15 68.304 64.354
C6-H10 1.0835 1.0843 C4-C5-H8 109.2771 109.088
N25-C2-
C14-C16 -111.460 -115.788
C7-C11 1.392 1.3929 C7-C5-H8 100.1893 100.201
C26-C2-
C14-C15 -45.540 -49.422
C7-H12 1.0829 1.084 C4-C6-C9 107.2673 107.668
C26-C2-
C14-C16 134.697 130.437
C9-C11 1.3963 1.3978 C4-C6-H10 121.7147 121.788
H55-C2-
C14-C15 -172.766 -176.292
C9-H13 1.083 1.0842 C9-C6-H10 125.171 125.091
H55-C2-
C14-C16 7.471 3.566
C11-Cl27 1.8237 1.7554 C5-C7-C11 113.104 113.11
C14-C2-
N25-N24 -113.650 -114.317
C14-C15 1.4058 1.4019 C5-C7-H12 112.3446 112.421
C14-C2-
N25-C42 69.525 71.318
C14-C16 1.4006 1.3959
C11-C7-
H12 115.1468 114.938
C26-C2-
N25-N24 9.079 8.210
C15-C17 1.3957 1.3917 C6-C9-C11 109.2771 109.088
C26-C2-
N25-C42 -167.745 -166.155
C15-H18 1.0867 1.0872 C6-C9-H13 100.1893 100.201
H55-C2-
N25-N24 126.247 125.504
C16-C19 1.3982 1.3951
C11-C9-
H13 107.2673 107.668
H55-C2-
N25-C42 -50.578 -48.861
C16-H20 1.0849 1.0859 C7-C11-C9 121.7147 121.788
C14-C2-
C26-C1 112.154 112.861
C17-C21 1.4076 1.4037
C7-C11-
Cl27 125.171 125.091
C14-C2-
C26-C3 -8.727 -7.907
C17-C22 1.086 1.0865
C9-C11-
Cl27 113.104 113.11
C14-C2-
C26-H28 -128.840 -128.348
C19-C21 1.4035 1.399
C2-C14-
C15 112.3446 112.421
N25-C2-
C26-C1 -8.582 -7.874
C19-H23 1.0862 1.087
C2-C14-
C16 115.1468 114.939
N25-C2-
C26-C3 -129.463 -128.642
C21-C29 1.5261 1.5226
C15-C14-
C16 109.2771 109.088
N25-C2-
C26-H28 110.424 110.917
N24-N25 1.3915 1.37
C14-C15-
C17 100.1893 100.201
H55-C2-
C26-C1 -122.075 -121.822
N25-C42 1.3483 1.3513
C14-C15-
H18 107.2673 107.668
H55-C2-
C26-C3 117.044 117.409
C26-H28 1.0969 1.096
C17-C15-
H18 121.7147 121.788
H55-C2-
C26-H28 -3.069 -3.032
C29-C30 1.5465 1.5402
C14-C16-
C19 125.171 125.091
C1-C4-C5-
C7 -179.695 -179.612
C29-C30 1.546 1.5402
C14-C16-
H20 113.104 113.11
C1-C4-C5-
H8 0.260 0.318
C29-H38 1.0993 1.0978
C19-C16-
H20 112.3446 112.421
C6-C4-C5-
C7 0.054 0.082
C30-H32 1.0965 1.0953
C15-C17-
C21 115.1468 114.938
C6-C4-C5-
C8 -179.991 -179.988
C30-H33 1.0953 1.094
C15-C17-
H22 109.2771 109.088
C1-C4-C6-
C9 179.712 179.627
C30-H34 1.0968 1.0955
C21-C17-
H22 100.1893 100.201
C1-C4-C6-
H10 -0.241 -0.339
C31-H35 1.0956 1.0944
C16-C19-
C21 107.2673 107.668
C5-C4-C6-
C9 -0.037 -0.066
C31-H36 1.0966 1.0954
C16-C19-
H23 121.7147 121.788
C5-C4-C6-
H10 -179.990 179.968
C31-H37 1.0968 1.0956
C21-C19-
H23 125.171 125.091
C4-C5-C7-
C11 -0.039 -0.047
C39-C40 1.493 1.5081
C17-C21-
C19 113.104 113.11
C4-C5-C7-
H12 179.976 179.971
C39-S41 1.8656 1.794
C17-C21-
C29 112.3446 112.421
H8-C5-C7-
C11 -179.994 -179.978
C39-C45 1.3602 1.3596
C19-C21-
C29 115.1468 114.939
H8-C5-C7-
H12 0.020 0.040
C40-N43 1.4066 1.3966
C1-N24-
N25 109.2771 109.088
C4-C6-C9-
C11 0.006 0.015
C40-O44 1.2485 1.2232
C2-N25-
N24 100.1893 100.201
C4-C6-C9-
H13 -179.979 -179.983
S41-C42 1.8391 1.776
C2-N25-
C42 107.2673 107.668
H10-C6-C9-
C11 179.958 179.981
C42-N43 1.3043 1.2987
N24-N25-
C42 121.7147 121.788
H10-C6-C9-
H13 -0.027 -0.018
C45-C46 1.4585 1.4571 C1-C26-C2 125.171 125.091
C5-C7-C11-
C9 0.006 -0.006
C45-C56 1.0902 1.0904 C1-C26-H3 113.104 113.11
C5-C7-C11-
Cl27 -179.973 -179.967
C46-C47 1.416 1.4105
C1-C26-
H28 112.3446 112.421
H12-C7-
C11-C9 179.992 179.977
C46-C48 1.4198 1.4156 C2-C26-H3 115.1468 114.939
H12-C7-
C11-Cl27 0.013 0.016
C47-C49 1.3931 1.3906
C2-C26-
H28 109.2771 109.088
C6-C9-C11-
C7 0.010 0.021
C47-H50 1.0867 1.0872
H3-C26-
H28 100.1893 100.201
C6-C9-C11-
Cl27 179.989 179.982
C48-C51 1.3882 1.3839
C21-C29-
C30 107.2673 107.668
H13-C9-
C11-C7 179.995 -179.980
C48-H52 1.0817 1.082
C21-C29-
C31 121.7147 121.788
H13-C9-
C11-Cl27 -0.026 -0.019
C49-C53 1.4036 1.4017
C21-C29-
H38 125.171 125.091
C2-C14-
C15-C17 179.751 179.385
C49-H57 1.0828 1.0831
C30-C29-
C31 113.104 113.11
C2-C14-
C15-H18 -0.979 -1.326
C51-C53 1.4054 1.4049
C30-C29-
H38 112.3446 112.421
C16-C14-
C15-C17 -0.483 -0.476
C51-H54 1.0837 1.0851
C31-C29-
H38 115.1468 114.939
C16-C14-
C15-H18 178.787 178.813
C53-O58 1.3842 1.3595
C29-C30-
H32 109.2771 109.088
C2-C14-
C15-C19 -179.424 -179.063
O58-C59 1.4618 1.4285
C29-C30-
H33 100.1893 100.201
C2-C14-
C16-H20 2.293 2.184
C59-H60 1.0988 1.0996
C29-C30-
H34 107.267 107.668
C15-C14-
C16-C19 0.806 0.799
C59-H61 1.0988 1.0996
C40-C39-
C45 113.104 113.11
C15-C14-
C16-H20 -177.477 -177.954
C59-C62 1.5233 1.5217
S41-C39-
C45 118.135 118.670
C14-C15-
C17-C21 -0.126 -0.137
C62-H63 1.0976 1.0969
C39-C40-
N43 113.471 112.705
C14-C15-
C17-H22 179.731 179.737
C62-H64 1.0976 1.0969
C39-C40-
O44 124.813 124.954
H18-C15-
C17-C21 -179.403 -179.432
C62-C65 1.5402 1.5336
N43-C40-
O44 121.716 122.339
H18-C15-
C17-H22 0.454 0.442
C65-H66 1.1 1.0984
C39-S41-
C42 86.313 87.757
C14-C16-
C19-C21 -0.532 -0.522
C65-H67 1.1 1.0984
N25-C42-
S41 119.688 119.294
C14-C16-
C19-H23 -179.815 -179.889
C65-C68 1.5369 1.5315
N25-C42-
N43 122.861 122.033
H20-C16-
C19-C21 177.745 178.228
C68-H69 1.0969 1.0956
S41-C42-
N43 117.447 118.672
H20-C16-
C19-H23 -1.538 -1.139
C68-H70 1.0958 1.0945
C40-N43-
C42 113.818 112.104
C15-C17-
C21-C19 0.407 0.421
C68-H71 1.0969 1.0956
S41-C39-
C45 118.135 118.670
C15-C17-
C21-C29 179.921 -179.872
For the title compound, the C-C bond length for pyrazole ring of C1-C26, C2-C26 are 1.5223/1.5184, 1.5576/1.5519 Ǻ, for thiazole ring for C39-C40 is 1.493/1.5081 Ǻ for the B3LYP/6-31G and B3LYP/6-31G (d,p) methods and these values are in between the single and double bond (1.54 Ǻ and 1.33 Ǻ) [23]. In the present work, the C-O bond length are observed at
C40-O44=1.2485/1.2232 Å, C53-O58 = 1.3842 / 1.3595Å, O58-C59=1.4618/1.4285Å which are in good agreement with the reported values for a similar derivatives (1.3871 Ǻ and 1.3653 Ǻ) [24].
The C-N bond length for the title compound are C1-N24, C2-N25, N25-C42, C40-N43, C42-N43 are 1.3062/1.294 Å, 1.5078/1.4931 Å, 1.3483/1.3513 Å, 1.4066/1.3966 Å, 1.3043/1.2987 Å which are in agreement with the literature [25]. The C-S bond length for the title compoundare 1.8656/1.794 Å for C39-S41 and for S41-C42 is 1.8656/1.794 Å, 1.8391 /1.776 Å and is similar toKuruvilla et.al [26] observed the C-S value at C5-S9= 1.748 Å and C8-S9=1.733 Å theoretically and experimentally at 1.8642, 1.862 Å. In the case of C-H bond lengths, (DFT/XRD) it is observed that aromatic C-H bonds measure 1.10/1.09 Å, which is equal to the experimental value. For the title compound, the bond lengths for C2-H55, C6-H10, C9-H13,C31-H35, C47-H50, C65-H66, C68-H70, C68-H71 are 1.0919/1.0919, 1.0835/1.0843, 1.083/1.0842, 1.0956/1.0944, 1.0867/1.0872, 1.1/1.0984, 1.0958/1.0945 and 1.0969/1.0956 Å observed. It was also very confined to experimental value [27]. The N-N bond lengths (DFT/XRD) are reported in the range 1.3409-1.3886Ǻ [28] and in the present case (BPT1), the N-N bond length is found at 1.3915/1.37 Ǻ for N24-N25. The thiazole ring is tilted from the phenyl ring as is evident from the torsion angles C45-C39-C40-N43=179.99/179.97˚, S41-C39-C40-H43 = -0.1457/-0.2921˚, C40-C39-S41- C42= 0.3713/ 0.414˚ and C45-C39-S41-C42= -179.74/-179.81˚.
For the title compound, the interactions between the thiazole and pyrazole groups are C40-C39- C45 = 132.917/132.571, S41-C39-C45 = 118.135/118.669, C39-C40-N43 = 113.471 /112.705, C39-C40-O44 = 124.813 / 124.954, N43-C40-O44 = 121.716/ 122.339, C39-S41-C42 = 86.313/87.757, N25-C42-S41= 119.688/119.294, N25-C42-N43 = 122.861 / 122.033, S41-C42- N43 = 117.447/118.672, C40-N43-C42 = 113.818 / 112.104 respectively.
4.2 Vibrational assignments
The title compound is consist of 71 atoms and has 207 fundamental modes of vibrations. The observed and simulated FT-IR and FT-Raman spectra of 5-(4-Butoxybenzylidene)-2-[3-(4- chlorophenyl)-5[4-(propan-2-yl)-4,5-dihydro-1H-pyrazol-1-yl]-1,3-thiazol-4(5H)-one at B3LYP level using 6-31G and 6-31G(d,p) basis sets are shown in Figures 2 and 3. The elaborated vibrational assignments of the title compound along with the calculated IR and Raman frequencies and normal mode descriptions are given in Table 2.
Figure 2:Observed FT-IR and simulated spectra of 5-(4-Butoxybenzylidene)-2-[3-(4- chlorophenyl)-5[4-(propan-2-yl)-4,5-dihydro-1H-pyrazol-1-yl]-1,3-thiazol-4(5H)-one
Figure 3:Observed FT-Raman and simulated spectra of 5-(4-Butoxybenzylidene)-2-[3-(4- chlorophenyl)-5[4-(propan-2-yl)-4,5-dihydro-1H-pyrazol-1-yl]-1,3-thiazol-4(5H)-one
Table 2:Vibrational assignments of 5-(4-Butoxybenzylidene)-2-[3-(4-chlorophenyl)-5[4- (propan-2-yl)-4,5-dihydro-1H-pyrazol-1-yl]-1,3-thiazol-4(5H)-one one by B3LYP/6-31G
and B3LYP/6-31G (d,p) basis sets.
Modes
Observed
wavenumbers (cm-1)
Calculated
wavenumbers(cm-1)
Vibrational assignments FT-IR FT-Raman B3LYP/6-
31G
B3LYP/6- 31G(d,p)
1 3150 3156 3152 CH(98)
2 3125 3123 CH(98)
3 3110 3107 CH(98)
4 3099 3095 CH(98)
5 3094 3088 CH(98)
6 3075 3078 3074 CH(98)
7 3058 3055 CH(98)
8 3045 3043 CH(98)
9 3038 3034 CH(98)
10 3033 3029 CH(98)
11 3026 3021 CH(98)
12 3016 3011 CH(98)
13 3002 3010 3003 CH(98)
14 3001 2995 assCH3(96)
15 2986 2983 assCH3(97)
16 2976 2971 assCH3(97)
17 2970 2966 assCH2(95)
18 2964 2959 assCH3(96)
19 2950 2947 assCH3(97)
20 2936 2935 CH(98)
21 2922 2930 2926 assCH3(98)
22 2922 2919 assCH2(96)
23 2910 2915 2912 ssCH2 (96)
24 2910 2906 assCH2 (97)
25 2896 2893 ssCH2 (96)
26 2888 2884 ssCH3(97)
27 2882 2878 ssCH3 (96)
28 2872 2869 assCH2 (97)
29 2856 2860 2854 ssCH3 (96)
30 2846 2843 CH(98)
31 2841 2835 ssCH2 (96)
32 2830 2822 ssCH2 (96)
33 1679 1680 1683 1680 CO(72), CC(20)
34 1644 1641 CC(70), CH(18)
35 1625 1623 CC(71), CH(20)
36 1613 1604 CC(70), CH(22)
37 1591
1596 1590 CC(68), CN(12),
CH(10) 38
1579 1572 CN(65), CC(14),
CH(10)
39 1563 1559 CC(64), CH(14), CC(11)
40
1538 1533 CC(60), CCl(18),
CN(10) 41 1541
1533 1529 CN(65), CC(15),
CH(12)
42
1525 1517 CN(65), CC(16),
CH(12)
43 1506 1510 1512 1508 CH(64), CC(18)
44 1499 1493 CH(64), CC(20) 45 1485 1485 1490 1486 CH(65), CC(18)
46 1481 1475 opb CH3 (72)
47 1477 1470 opb CH3(75)
48 1472 1466 opb CH3(73)
49 1455 1451 ipb CH3(73)
50 1442 1436 ipb CH3(72)
51 1437 1430 ipb CH3(72)
52 1429 1422 sci CH2(80)
53 1415 1423 1415 sci CH2(80)
54 1420 1408 CH(65), CC(21)
55 1414 1403 CH(66), CC(22)
56 1400 1408 1399 sci CH2(80) 57 1394 1402 1395 sci CH2(81)
58 1388 1383 sb CH3(75)
59 1385 1379 sb CH3(75)
60 1376 1370 sb CH3(74)
61 1370 1362 CN(64)
62 1350 1356 1351 CN(65), CH(14)
63 1346 1342 CO(67)
64 1329 1335 1330 CH(67)
65 1327 1323 CH(68)
66 1310 1318 1312 CH(66), CC(14)
67 1308 1302 CH(66), CC(15)
68 1295 1301 1297 CO(66), CH(12)
69 1280 1285 1281 CH(66), CC(12)
70
1278 1275 CH(66), CC(12),
CN(10)
71
1266 1263 CH(64), CN(18),
CC(10) 72 1254 1250
1260 1254 CO(65), CH(17),
Ccl(10)
73
1248 1244 CH(66), CC(12),
CN(10) 74 1230
1236 1231 CC(63), CH(16),
CN(12)
75 1215 1221 1217 CC(65), CH(18)
76 1214 1207 rockCH2(70), CH(12)
77 1200 1210 1200 rockCH2(70), CH(12)
78 1195 1191 CC(65), CH(14)
79 1186 1182 CC(66), CH(15)
80 1173 1179 1175 rockCH2(70)
81 1165 1163 rockCH2(69)
82 1162 1158 CC(68)
83 1145 1143 CC(68)
84 1140 1136 CC(68)
85 1131 1127 CC(66)
86 1118 1125 1120 CC(66)
87 1118 1113 CH2(75)
88 1110 1105 CH2(75)
89 1102 1097 CH(60)
90 1093 1088 CH(60)
91 1080 1075 CC(65), CH(13)
92 1056 1051 CH2(75)
93 1044 1040 CH2(74)
94 1032 1028 opr CH3(62), CC(10) 95 1021 1017 opr CH3(63), CC(10)
96 1013 1009 CC(74), CO(16)
97 1002 1003 1000 opr CH3(64)
98 992 989 CC(66), CH(15)
99 984 980 CO(66), CH(14)
100 965 963 CO(65), CH(12)
101 960 956 CH(58), ring(26)
102 948 950 953 948 CH(58), ring(26)
103 935 933 CH(58), ring(25)
104 932 929 CH(58), ring(21)
105
925 921 CC(72), CO(15),
CH(10)
106 924 916 CC(63), CH(18)
107 909 910 914 910 CC(64), CH(20)
108 889 885 CH(58), ring(18)
109 883 879 NN(65), CH(18)
110 867 865 CH(55), CC(18)
111 845 842 CC(18), wagg CH2(12)
112 840 834 CH(62), ring(18)
113 827 833 829 CH(58), CC(21)
114 823 820 CH(58), CC(20)
115 817 812 wagg CH2(58), CC(20) 116 800 805 802 wagg CH2(58), CC(21)
117 800 795 CH(56), CC(18)
118 796 790 CH(55), CC(17)
119 792 786 CC(63), CH(18)
120 785 780 wagg CH2(57)
121 779 773 CH(58), ring(18)
122 775 769 wagg CH2(58), CC(20)
123 768 765 ipr CH3(68)
124 760 756 ipr CH3(68)
125 747 741 748 ipr CH3(68)
126 738 731 CS(74), CH(20)
127 720 726 720 CN(64), CC(16)
128 715 711 CCipr CH3(19)
129 706 700 CH(58), ring(16)
130 697 694 CS(75), CH(20)
131 690 688 CC(60), ipr(17)
132 685 679 CO(58)
133 670 666 CC(68)
134 664 659 CC(68)
135 658 655 CC(68)
136 653 648 ring(56)
137 646 643 ring(56)
138 640 638 ring(56)
139 635 631 CC(66)
140 630 626 CO(51), ring(17)
141 625 620 CO(50), ring(17)
142 616 612 CC(58)
143 608 603 CC(59)
144 597 602 598 CCl(68), ring(25)
145 590 586 CC(58)
146 588 580 ring(52)
147 575 573 CC(58)
148 565 561 CC(58)
149 551 553 550 ring(52)
150 545 541 ring(53)
151 539 535 CC(59)
152 531 523 ring(52)
153 522 518 ring(50)
154 510 506 CC(58)
155 503 502 503 500 CC(58)
156 487 481 ring(54)
157 477 472 CC(59)
158 480 466 CC(59)
159 457 463 460 ring(55)
160 438 445 440 CCl(60), ring(15)
161 427 422 ring(52)
162 411 417 410 ring(54)
163 407 401 ring(50)
164 392 389 ring(52)
165 381 375 ring(52)
166 371 366 CC(53)
167 360 354 CC(54)
168 345 349 345 CC(54)
169 337 332 CC(54)
170 330 325 CC(55)
171 319 314 CC(54)
172 303 299 CC(53)
173 296 293 CC(55)
174 291 286 CC(54)
175 280 275 CCl(55)
176 273 268 CC(50)
177 262 259 CC(54)
178 246 242 CC(50)
179 230 221 CH3(55)
180 218 212 CH3(54)
181 210 206 CH3(54)
182 197 191 CC(55)
183 189 185 CC(55)
184 176 173 CC(55)
185 166 162 ring(58)
186 150 158 151 CC(55)
187 146 142 ring(55)
188 135 141 136 CC(56)
189 135 128 ring(56)
190 120 126 120 CC(56)
191 112 102 ring(53)
192 92 95 89 ring(54)
193 86 79 ring(53)
194 80 74 ring(54)
195 75 69 ring(53)
196 66 57 ring(51)
197 60 49 ring(58)
198 52 46 ring(58)
199 48 43 ring(58)
200 35 41 35 ring(54)
201 37 30 ring(53)
202 30 24 ring(54)
203 25 22 ring(54)
204 23 20 ring(53)
205 17 16 ring(54)
206 12 10 ring(54)
207 7 6 ring(54)
-stretching, νsym-sym stretching, νasym-asym stretching, δ-in-plane bending, γ-out-of-plane bending, -scissoring, -wagging, -rocking, τ-twisting.
4.2.1 C-H vibrations
The substituted aromatic structures show the presence of C-H stretching vibration in the region 3100- 3000 cm-1 which is the characteristic region for the identification of C-H stretching vibrational modes [29-31].
Soleymani et al [32] observed the C-H vibrations at 3112, 3113 3071, 2978 cm-1 theoretically and 3050, 3128 cm-1 experimentally. Saruadevi et al [33] reported the C-H stretching modes are observed at 3096 cm-1 in the IR spectrum and at 3097, 3063, 3038 cm-1 in the Raman spectrum experimentally and at 3098, 3075, 3072, 3066, 3055, 3044 cm-1 theoretically. Renjith et al [34] reported the C-H stretching vibrations at 3097, 3086, 3081, 3057, 3055 cm-1 in the IR spectrum and 3077, 3064 cm-1 in the Raman spectrum. C-H stretching are found at 3090, 3062, 2964, 2940 cm-1 in FT-Raman and at 2934, 2771 cm-1 in FT-IR by Kuruvilla et.al. [26]. Kuruvilla et.al. [27] observed the C-H vibrations experimentally at 3050, 2900 cm-1 in FT-IR spectrum and 3042, 2976, 2891, 2850 cm-1 in FT- Raman
spectrum. For our title molecule, the C-H stretching vibrations observed at 3150, 3075, 3002 cm-1 for FT-Raman spectrum, 3156,3125, 3110, 3099, 3094, 3078, 3058, 3045, 3038, 3033, 3026, 3016, 3010, 2936, 2846 cm-1 and 3152, 3123, 3107, 3095, 3088, 3074, 3055, 3043, 3034, 3029, 3021, 3011, 3003, 2935,2843 cm-1 are calculated by B3LYP method with 6-31G and 6-31G(d,p) basis sets.
Jeyasheela et al [35] observed the C-H in-plane bending vibrations at 1179, 1059 cm-1 in Raman spectrum and at 1167, 1086, 1046 cm-1 in IR spectrum and computed bands appeared at 1318, 1170, 1094, 1059 cm-1.Tamilelakkiya et al [36] observed the C-H stretching mode at 1543, 1440 cm-1 in IR spectrumand 1540, 1477 cm-1 in Raman spectrum and was calculated in the range of 1511-1445 cm-1. Saraudevi et al [33] reported the C-H bands theoretically at 1277, 1248, 1170, 1140, 1108, 1102, 1042 cm-1 and experimentally observed at 1250, 1114, 1044 cm-1 in IR spectrum and 1279, 1246, 1168, 1038 cm-1 in Raman spectrum. In our title molecule, the C-H in-plane bending vibrations occurs at 1506, 1485, 1329 and 1510, 1485, 1310, 1280 cm-1observed in FT-IR and FT-Raman spectrum and calculated theoretically at 1512, 1499, 1490, 1420, 1414, 1335, 1327, 1308,1285, 1278, 1266, 1248 and 1508, 1493, 1486, 1475, 1408, 1403, 1330, 1323, 1302, 1281, 1275, 1263, 1244 cm-1 for the same basis set.
Saraudevi et al [33] observed the CH out-of-plane bending vibrations theoretically at 930, 897, 895, 858, 818, 811, 731 cm-1 and experimentally at 931, 896, 855, 816 for IR, 788, 729 cm-1 for Raman spectrum. In the present work, the C-H out-of-plane bending vibrations occurs at 948, 827and 950 for FT-IR and FT-Raman spectrum and calculated theoretically at 960, 953, 935, 932, 889, 840,833, 823,796, 779, 706 and 956, 948, 933, 929, 885, 865, 834, 829, 820, 795, 790, 773,700 by B3LYP/6- 31G and B3LYP/6-31G(d,p) respectively.
4.2.2 CH3 vibrations
The CH3 modes are occurs in the region 2900-3050 cm-1 [37]. Asymmetric and symmetric stretching modes of a methyl group attached to the benzene ring are usually downshifted because of electronic effects and are expected near 2925 and 2865 cm-1 for asymmetric and symmetric stretching vibrations[38].
The asymmetric stretching modes of the methyl group are calculated at 3047, 3039, 3022, 3003 cm-1 by Paniker et al [39]. For the title compound, asymmetric stretching vibrations observed at 2922 cm-1
for IR spectrum, theoretically observed at 3001, 2986, 2976, 2964, 2950, 2930 cm-1 and 2995, 2983, 2971, 2959, 2947, 2926 cm-1by B3LYP/6-31G and B3LYP/6-31G(d,p) respectively.
The symmetric modes are observed at 3038, 2946 cm-1 in the IR spectrum and theoretically observed at 2948, 2943 cm-1 by Paniker et al [39]. Saraudevi et al [33] reported the CH3 stretching mode at 3027, 2970, 2908 cm-1 and experimentally observed at 3002, 2972, 2970 cm-1. Parveen et.al [24]
observed the CH3 stretching modes are assigned at 3002, 2980, 2958, 2914 cm-1 in the IR spectrum, 2960, 2938 cm-1 in the Raman spectrum and theoretically occurs in the range 3032-2906 cm-
1.Murugavel et al [40] theoretically the C-H stretching modes of methyl group at 3056, 3022, 2984, 2964, 2944, 2917 and 2911 cm-1 is the experimental values 3024 and 2943 cm-1. Alphonsa et al [41]
reported CH3 stretching mode for FT-IR spectrum at 2983, 2924 cm-1 and for FT-Raman at 2983, 2944, 2923 cm-1 and asymmetric and symmetric stretching vibrations observed at 3059, 3053 cm-1 for FT-IR, Raman spectrum and theoretically at 3012 cm-1.For the title compound, symmetric stretching vibrations observed at 2856 cm-1 for IR spectrum, theoretically observed at 2888, 2882, 2860 cm-1 and 2884, 2878, 2854 cm-1by B3LYP/6-31G and B3LYP/6-31G(d,p) respectively.
In this work, the CH3 in-plane bending vibrations theoretically observed at opb = 1481, 1477, 1472 cm-1, ipb= 1455, 1442, 1437 cm-1, sb = 1388, 1385, 1376 cm-1, ipr = 768, 760, 741 cm-1, CH3 =230, 218, 210 cm-1 by B3LYP/6-31G method and opb = 1475, 1470, 1466 cm-1, ipb= 1436, 1430, 1422 cm-
1, sb =1383, 1379, 1370 cm-1, ipb= 765, 756, 748 cm-1, CH3 = 221, 212, 206 cm-1 by B3LYP/6- 31G(d,p) method. For the title compound, the out-of-plane bending vibration occurs at 1002 cm-1for FT-IR spectrum. The theoretically predicted values by B3LYP/6-31G opr =1032, 1021, 1003 cm-1 by B3LYP/6-31G and 1028, 1017, 1000 cm-1 by B3LYP/6-31G (d,p) methods.
4.2.3 CH2 group
The stretching vibrations of the CH2 group and deformation modes of CH2 group (scissoring, wagging, twisting and rocking modes) appears in the regions 3000 ± 20, 2900 ± 25, 1450 ± 30, 1330 ± 35, 1245 ± 45, 780 ± 55 cm-1 respectively [37, 42,30].
Parveen et.al [24] observed the CH2 stretching modes at 2923 cm-1 in the Raman spectrum and at 2926, 2966 cm-1 theoretically. The deformation modes of CH2 are assigned at 1439, 1295, 1220, 1148 cm-1 in the IR spectrum, 1146 cm-1 in the Raman spectrum. Murugavel et al [40] the CH2 stretching
vibrations are calculated at 2991 cm-1 (asymmetric) and 2944 cm-1 (symmetric). Asymmetric bending of is found at 1275 cm-1 which is consistent with the DFT value of 1274 cm-1. Minithra et al [43]
observed CH2 asymmetric and symmetric stretching at 2982, 2932 cm-1 and 2905, 2893 cm-1 and assigned at 2978, 2930, 2885 cm-1 in the IR spectrum and at 2971, 2935, 2898 cm-1 in the Raman spectrum. For the title compound, the asymmetric CH2 stretching calculated at 2970, 2922, 2910, 2872 by B3LYP/6-31G method and 2933, 2919, 2906, 2869 by B3LYP/6-31G(d,p) method. The symmetric CH2 stretching observed at 2910 in FT-Raman spectrum and the computed values are 2915, 2896, 2841, 2830 by B3LYP/6-31G method and 2912, 2893, 2835, 2822 by B3LYP/6-31G(d,p) method. For the title compound, CH2 scissoring band observed at 1394, rocking at 1173 in the IR spectrum and scissoring at 1415, 1400, rocking at 1200, wagging at 800 in the Raman spectrum. For the title compound, the CH2 stretching modes are observed at sci = 1429, 1423, 1408, 1402 cm-1, rock = 1214, 1210, 1179, 1165 cm-1, = 1118, 1110, 1056, 1044 cm-1, wagg. = 817, 805, 785, 775 cm-1 by B3LYP/6- 31G, sci = 1422, 1415, 1399, 1395 cm-1, rock = 1207, 1200, 1175, 1163 cm-1, = 1113, 1105, 1051, 1040 cm-1, wagg. = 812, 802, 780, 769 cm-1 by B3LYP/6-31G (d,p) methods respectively.
4.2.4 C-O vibrations
The C-O stretching vibrations [44, 37] are expected in the region 1715-1600 cm-1. The in-plane deformation of C-O found in the region 625 ± 70 cm-1and out-of-plane bending is in the range 540 ± 80 cm-1[37].
Lucose et al [45] observedC-O stretching vibrations at 1632 cm-1 in IR spectrum and theoretically at 1636 cm-1 (DFT). In-plane bending at 569 cm-1 in IR and 555 cm-1 in DFT is assigned as this mode and out-of-plane bending at 673, 676 cm-1 in the IR spectrum.
The C=O stretching vibration appears both in the FT-IR and FT-Raman spectra due to intra molecular charge transfer from donor atom to acceptor atom through and bonds conjugated path, which can induce large variation in dipole and molecular polarizability of the molecule and hence high activity in both spectra [37]. Renjith etal [34] observed the C-O modes at 1625 at IR and 1614, 1626 cm-1 at Ramanspectrum. The C-O stretching modes are reported at 1786, 1603, 1027 cm-1 and at 1726, 1629 cm-1 in the FT-IR, Raman spectrum and 1184, 1083, 1010, 974, 696 cm-1 assigned theoretically by Sakthivel et al [46]. Benzon et al [47] reported the C-O stretching mode at 1212 cm-1
(IR), 1228 cm-1 (Raman) and at 1229 cm-1 theoretically. For the title molecule, C-O stretching vibrations observed at 1679, 1254 cm-1 in IR spectrum and 1680, 1295 cm-1 in Raman spectrum. The reported values for C-O = 1683, 1301, 1260 cm-1, CO = 1346, 984, 965 cm-1, CO= 685, 630, 620 cm-1 by B3LYP/6-31G method, C-O = 1680, 1297, 1254 cm-1, CO = 1342, 980, 963 cm-1, CO=
679, 626, 620 cm-1 by B3LYP/6-31G (d,p) methods respectively.
4.2.5 C-C vibrations
C-C stretching vibrations occur in the range of 1625-1465 cm-1 [48]. The in-plane and out-of plane bending modes of C-C were reported at 725± 95 and 595 ± 120 cm-1 [49].
The C-C band observed by Kuruvilla et al [26] at 1579, 1531, 1439, 1380, 1123 for FT-Raman and for FT-IR bands at 1428, 1235, 1002 cm-1.Soleymani et.al [32] observed C-C band at 1625, 1590, 1575, 1540, 1470, 1465, 1430, 1380, 1280 cm-1. Tamil elakkiya et al [36] observed the C-C band at 1313, 1039 cm-1 and calculated at 1600, 1625, 1319, 1054 cm-1. In the present work, the C-C vibrations observed at 1591, 1230, 1118, 909 in IR spectrum, 1215, 910 in Raman spectrum. The reported values at 1644, 1625, 1613, 1596, 1538, 1236, 1221, 1195, 1186, 1162, 1145, 1140, 1131, 1125, 1080, 1013, 992, 925,924, 914, 845 cm-1 by B3LYP/6-31G method, 1641, 1623, 1604, 1590, 1533, 1231, 1217, 1191, 1182, 1158, 1143, 1136, 1127, 1120, 1075, 1009, 989, 921, 916, 910, 842 cm-1 by B3LYP/6- 31G (d,p) methods respectively. The C-C in-plane bending observed at 503 and 502, 345 in IR and Raman spectrum and the reported values are 792, 715, 690, 616, 608, 590, 575, 565, 539, 510, 503, 477, 480, 360, 349 cm-1 by B3LYP/6-31G method,786, 711, 688, 612, 603, 586, 573, 561, 535, 506, 500, 472, 466, 354, 345 cm-1 by B3LYP/6-31G (d,p) methods. The C-C out-of-plane bending vibration assigned at 150, 135, 120 in Raman spectrum and the calculated values are at 330, 319, 303, 296, 291, 273, 262, 246, 197, 189, 176, 158, 141, 126 cm-1 by B3LYP/6-31G method, 325, 314, 299, 293, 286, 275, 268, 242, 191, 185, 173, 151,136, 120 cm-1 by B3LYP/6-31G (d,p) methods.
4.2.6 C-N vibrations
The CN stretching modes are expected in the region 1400-1200 cm-1
Sandhyarani et al [50] reported the C-N stretching mode at 1319 cm-1. Benzon et al [47] reported at 1247, 129, 938 cm-1 theoretically, 1268, 11135, 926 cm-1 in the Raman spectrum and 924 cm-1 in the IR spectrum. The C-N stretching modes were reported at 1268, 1220, 1151cm-1 theoretically by Malek
et.al [51]. Al-Alshaikh et.al.[52] observed C-N stretching mode at 1329, 1092, 997 cm-1 in the IR spectrum, 1328 cm-1 in the Raman spectrum and theoretically at 1479, 1472, 1331, 1097, 998 cm-1 . Bhagyasree et al [53] reported C-N stretching modes at 1247 and 1236 cm-1 and Mary et al [14]
reported the C-N stretching modes at 1233, 1209 cm-1 by theoretically and 1238 cm-1 by Raman spectrum. shanaparveen et al [28] assigned the C-N stretching mode at 1579 cm-1 and IR spectrum at 1553 cm-1 . In the present work, C-N stretching vibrations observed at 1541 and 1350, 720 in IR and Raman spectrum. The predicted values at 1579, 1533, 1525, 1370, 1356, 726 and 1572, 1529, 1517, 1362, 1351, 720 cm-1 by B3LYP/6-31G and 6-31G(d,p) methods.
4.2.7 N-N vibrations
N-N stretching mode occurs at 1417-1372 cm-1[54].The υN-N has been reported at 1151 cm-1 by Crane et al [55], 1121 cm-1by Bezerra et al [56] and 1130 cm-1 El-behery and El-Twigry [57] and 1083 cm-1 theoretically by Sundaragensan et al [58]. Binil et al [59] reported the N-N stretching mode at 1138 cm-1 in IR, 1139 cm-1 in Raman and 1136 cm-1 theoretically. For Murugavel et al [40], N-N stretching vibrations allocated at 1083, 1119 cm-1 by DFT technique and experimentslly at 1082 cm-1 in FTIR spectrum. For the title molecule, N-N stretching mode is calculated at 883 and 879 cm-1 by B3LYP/6-31G and 6-31G(d,p) methods respectively.
4.2.8 C-S vibrations
This vibration cannot be identified easily as it results in weak infrared bands, which is susceptible to coupling effects and is also of variable intensity. In general, the C-S stretching vibration was reported in 750-600 cm-1 [60].
Benzon et al [27] reported value this mode at 1515 cm-1 in the IR spectrum, 1520 cm-1 in the Raman spectrum, 1517 cm-1 theoretically. The C-S stretching mode observed for Sarau et al [23] are assigned at 759, 660 cm-1 theoretically and experimentally observed at 756, 665 cm-1 and 756, 658 cm-1in the IR and Raman spectrum. Kuruvilla etal [33] observed these vibrations at 822,608 cm-1 and theoretically at 714 cm-1. The C-S stretching modes were observed by Coates [53] in the range 710- 687cm-1 while Kwiastkowski et al [61] reported the vibration at 839 and 608 cm-1. The C-S stretching vibrations are reported at 783, 632 cm-1 and 633 cm-1 IR, Raman spectrum and 785, 635 cm-1 theoretically found by El-Azab et al [62]. The C-S stretching vibrations are reported at 770 cm-1 in the
IR spectrum, and at 770, 636 cm-1 theoretically assigned by ShaheenFatma et al [48]. In the present work, C-S vibrations calculated at 738, 697 and 731, 694 cm-1 by B3LYP/6-31G and 6-31G(d,p) methods respectively.
4.2.9 C-Cl vibrations
The vibrations belong to C-Cl absorption is obtained in the region between 850-550 cm-1 [63].
Kuruvilla1 et al [26] observed theoretically at C-Cl vibration at 694 and 415 cm-1 and experimentally at 710-505 cm-1. Jayasheela et al [35] reported this band at 725 and 720 cm-1 4- chlorophenyl ({[(1E)-3-(1Himidazol-1-yl)-1-phenylpropylidene]amino}oxy) methanone for theoretically and experimentally. For the title compound, the vibrations occurs at for C-Cl= 597, C- Cl=438 in FT-IR spectrum and theoretically at C-Cl=602 and 598 cm-1, C-Cl=473 and 440 cm-1, C-Cl=280 and 275 cm-1 by B3LYP/6-31G and 6-31G(d,p) methods respectively.
4.2.10 Ring vibration
The thiazole ring in-plane bending vibrations are observed at 551, 457, 411 by FT-IR spectrum and theoretically at 588, 553, 545,531, 522, 487, 463, 427, 417, 407, 392,381, 166, 146, 112, 52, 48 cm-1 by B3LYP/6-31G method and 580, 550, 541, 523, 518, 481, 460, 422, 410, 401, 389, 375, 162, 142, 102, 49, 46, 43 cm-1 by B3LYP/6-31G(d,p) method. The ring out-of-plane bending observed at 35 in FT-Raman spectrum, theoretically at 135, 95, 86, 80, 75, 66, 41, 37,30, 25, 23, 17, 12, 7 cm-1 by B3LYP/6-31G method and 128, 89, 79, 74, 69, 57, 35, 30, 24, 22, 20, 16, 10, 6 cm-1 by B3LYP/6- 31G(d,p) method.
4.3 Molecular electrostatic potential (MEP) surface analysis
Molecular electrostatic potential at a point in space around a molecule gives information about the net electrostatic effect produced at that point by total charge distribution (electron + proton) of the molecule and correlates with dipole moments, electro-negativity, partial charges and chemical reactivity of the molecules. It provides a visual method to understand the relative polarity of the molecule [64, 65]. An electron density iso-surface mapped with electrostatic potential surface depicts the size, shape, charge density and site of chemical reactivity of the molecules. Figure 4 illustrates the charge distributions of the molecule two dimensionally. As it can be seen from the figure, the different
values of the electrostatic potential at the surface are represented by different colours; red represents region of most electronegative electrostatic potential, blue represents region of the most positive electrostatic potential and green represents region of zero potential. Potential increases in the order red
< orange < yellow < green < blue. Blue indicates the strongest attraction and red indicates the strongest repulsion. Region of negative potential are usually associated with the lone pair of electronegative atoms. As can be seen from the MEP map of the title molecule, more reactive sited are close to C=O (C40-O44) groups, the region having the most negative potential over oxygen atom O44 and O58, then all the hydrogen atoms have positive potential.The negative potential which is represented by red colour corresponds to an interaction of a proton by aggregate the electron density of the molecule represented by red yellow shade and blue region is positive which corresponds to the repulsion of the proton represented by blue shades.
Figure 4: Molecular electrostatic potential surfaces of 5-(4-Butoxybenzylidene)-2-[3-(4- chlorophenyl)-5[4-(propan-2-yl)-4,5-dihydro-1H-pyrazol-1-yl]-1,3-thiazol-4(5H)-one
The strong negative region spread over the phenyl rings, nitrogen atom and oxygen atom of the hydroxyl group and these are possible sites of electrophilic sites. The positive electrostatic potential regions are fully covered all the hydrogen atoms and it represents the possible site of the nucleophilic sites in the MEP plot.
4.4Frontier molecular orbital (FMO) study
DFT method with 6/31G(d,p) basis set is applied to compute the energy of HOMO and LUMO levels and the energies are shown in Table 3. The Frontier molecular orbitals (FMO) play a significant function in the electric and quantum chemistry [66]. The pictorial demonstration of these different FMOs is shown in Figure 5. The HOMO is the donor and LUMO is acceptor orbital and the energy difference between HOMO and LUMO have been used to investigate the global reactivity descriptors.
The electrophilic index (), hardness () and chemical potential (µ) are known reactivity parameters.
These parameters are considered as highly successful descriptors for biological activity.Moreover, electronegativity (),electron affinity (A), ionization potential (I) are also determined using the energies of frontier molecular orbitals and these reactivity parameters used in understanding the site selectivity and the reactivity. The compounds that possess positive electron affinity are known as electron acceptors and might participate in charge transfer reactions. The electron donation strength for any donor compound can be measured using ionisation potential is the energy which need to take off an electron from the HOMO. Electronegativity is known as one for the most important chemical properties which defined as power of species to attract electrons towards itself. The large EHOMO- ELUMO differences define a hard species, which means compound is more stable and less reactive.
While, small EHOMO- ELUMO gap defines a soft species is less stable and more reactive. The calculated energy of HOMO is -5.3304 eV and LUMO is -1.9783 eV and the energy gap for the title compound is 3.3521 eV and is a hard one. Ionization potential (I) =5.3304 eV, Electron affinity (A) = 1.9783 eV, Global hardness () = 1.6761 eV, Softness () = 0.5966 eV, Chemical potential () = -3.6544 eV, Electrophilicity index () = 3.9838 eV. The values for chemical potential and electrophilicity index are small that indicates the reactive nature of the title compound which confirms the bioactivity of the title molecule by the positive value of chemical softness.
ELUMO= -5.3304 eV ELUMO1 = - 5.9862 eV ELUMO2= -6.4777eV
E=3.3557eV E = 4.5911eV E = 5.8023eV
EHOMO = -1.9783 eV EHOMO1 = -1.3951 eV EHOMO2 = -0.6754 eV
Figure 5:Patterns of the principle highest occupied and lowest unoccupied molecular orbital 5-(4-Butoxybenzylidene)-2-[3-(4-chlorophenyl)-5[4-(propan-2-yl)-4,5-dihydro-1H-pyrazol-1-
yl]-1,3-thiazol-4(5H)-one
Table 3 HOMO-LUMO energies for 5-(4-Butoxybenzylidene)-2-[3-(4-chlorophenyl)-5[4- (propan-2-yl)-4,5-dihydro-1H-pyrazol-1-yl]-1,3-thiazol-4(5H)-one by B3LYP/6-31G (d,p)
basis set Molecu
lar properti
es Energ y (eV)
Energ y gap
(eV)
Ionisati on potentia
l(I)
Electron affinity
(A)
Global hardness
n ()
Global softness
()
Chemica l potensia
l ( )
Global Electroplici
ty()
EHOMO
- 5.3304
3.3521 5.3304 1.9783 1.6761 0.5966 -3.6544 3.9838 ELUMO
- 1.9783
EHOMO-1
- 5.9862
4.5911 5.9862 1.3951 2.2955 0.4356 -3.6907 2.9669 ELUMO-1
- 1.3951
EHOMO-2
- 6.4777
5.8023 6.4777 0.6754 2.9012 0.3447 -3.5765 2.2045 ELUMO-2
- 0.6754
4.5 Reduced density gradient
RDG is a pictorial visualization of various kinds of non-covalent interactions directly in the real space using Multiwfn and plotted by visual molecular dynamics (VMD) program [20,21].
Noncovalent interactions are very weak when compared with covalent bonds and hence play a vital role in nature. To understand the nature of inter molecular interaction of the title compound, RDG analyses were carried out and the resultant graphs are shown in Figure 6.
According to this graph, the green regions represent weak attractive interactions (λ2≈0) such as Van der Waals interaction; strong attractions like H-bond, C-Cl bonds are represented by blue colour. The red colour represents steric repulsion appears in the inside of phenyl rings, pyrazole, and 4- Butoxybenzylidene while van der waals interactions took place near 4(propan-2-yl) and over hydrogen atoms. The negative values of λ(2)ρ indicates strong attractive interactions, while the positive values mean the repulsive interactions.
Figure 6:Plots of the RDG versus λ(2)ρ of 5-(4-Propan-2-yl)benzylidene)-2-[3-(4- chlorophenyl)-5[4-(propan-2-yl)phenyl-4,5-dihydro-1H-pyrazol-1-yl]-1,3-thiazol-4(5H)-one
4.6 Molecular docking
Molecular docking is a computer-assisted drug design (CADD) method used to predict the favourable orientation of a ligand (drug) to a target (receptor) when bound to each other to form a
stable complex. By understanding the favoured orientation can be used to find out the strength of binding affinity between ligand and target site, e.g. by docking score [67]. Moreover, docking study can be used to find out type of interactions between ligand and receptor like hydrogen bonding and hydrophobic interactions. Hence, molecular docking can be considered as first-line technique for a pharmaceutical lead discovery [68].Molecular docking studies were carried out to understand the binding profile of thiazole derivatives and to support the in vitro anticancerous activity. Automated docking was used to determine the orientation of inhibitors bound in the active site of Tubulin(PDB ID=4YJ2), which the protein has anti-cacerous activity. Protein 4YZJ has antiviral and 1OQE, 4YJE has anti tumer activity. A Lamarckian genetic algorithm method, implemented in the program AutoDockVina software was employed. The ligand used for docking was the optimized structure at B3LYP/6-31G (d, P). The files were prepared in a pdb format. The protein structure file (PDB ID:
4YZJ) taken from RCSB Protein Data Bank (PDB) was prepared for docking by removal of water molecules, adding polar hydrogens and Kollman charges to the structure file. In silico prediction of amino acids involved in the active site of protein responsible for binding with the ligands are obtained from the co-crystallized endogenous ligand from the PDB file. The ligand was docked in the functional sites of the selected protein and minimum docking energy value was examined. Docked conformation which had the lowest binding energy was chosen to scrutinize the molecule mode of binding. The molecular docking binding energies and inhibition constants were also obtained and listed in Table 4 The title compound taken as the ligand interactions with proteins are shown in Figure 7.
Figure 7:Ligand - 5-(4-Butoxybenzylidene)-2-[3-(4-chlorophenyl)-5[4-(propan-2-yl)-4,5- dihydro-1H-pyrazol-1-yl]-1,3-thiazol-4(5H)-one, Proteins – 1JH5,1OQE, 4YJ2 and 4JZJ
Table 4:Binding affinity for docking in5-(4-Butoxybenzylidene)-2-[3-(4-chlorophenyl)-5[4- (propan-2-yl)-4,5-dihydro-1H-pyrazol-1-yl]-1,3-thiazol-4(5H)-one
Drug Protei n
Type of activity
Bindi ng affinit y(kcal /mol)
Etimated inhibition
constant Ki(µM)
Bonded
residues Nature of bond
Bond distanc e (Å)
RMS D
In 5-(4- Butoxybenzylidene)-2- [3-(4-chlorophenyl)- 5[4-(propan-2-yl)-4,5- dihydro- -1H-pyrazol-1-yl]- 1,3-thiazol-4(5H)-one
-4.7 360.43 ASN A-42
Conventional
hydrogen bond 3.31
87.20 6
-4.33 667.85 PRO A-15 Alkyl 4.1
71.63 5
1OQ E
Antitumer
-4.19 845.86 ILE A-15 Alkyl 4.17
78.41 4
-3.97 1.23(mM) GLU A-41
Conventional
hydrogen bond 4.32
81.10 6
-3.8 1.64 (mM) ASN A-42
Conventional
hydrogen bond 4.55
82.08 3
4YJ2 Anticance r
-4.7 358.4 LEU A-397 Alkyl 3.72
80.98 3
-4.6 426.72
PRO A-
175 Alkyl 3.82
121.0 29
-4.21 817.23
PRO A-
173 -alkyl 4.24
111.2 28
-4.57 447.01
PRO A-
184 -alkyl 4.39
87.28 3
-4.53 482.07 GLN A-176
Carbon hydrogen
bond 4.55
94.62 7
4YJE Antitumer
-5.42 106.41
MET A- 438
Conventional
hydrogen bond 3.64
49.94 4
-5.42 106.79
MET A- 438
Conventional
hydrogen bond 3.8
47.99 5
-5.32 126.67 TYR A-486
carbon hydrogen
bond 3.89
48.81 2
-5.2 155.59
MET A- 438
Conventional
hydrogen bond 4.02
33.73 2
-4.95 234.91
MET A- 438
Conventional
hydrogen bond 4.17
25.06 4
4JZJ Antiviral
-5.17 163.56
PHE A:
107 van der waals 3.85
36.10 6
-4.95 236.07 TRP A: 47 van der waals 4.65
36.42 7 -4.49 514.73
PHE A: van der waals 4.94
30.37
107 4
-4.23 790.86
TRP A:
106 - Stacked 5.05
38.12 3
-4.2 838.87 LEU A: 45 - Stacked 5.08
32.47 1
4.6.1 Anti-tumer activity
Interaction of antitumor protein 1OQE shows the existence of many conventional bonds such as three conventional hydrogen bonds and two alkyl bond interaction with amino acid (ASN A:
42, GLU A: 41, ASN A: 42, PRO A: 15, ILE A: 15) with different binding energies (-4.7, -3.97, - 3.8, -4.33, -4.19)kcal/mol, inhibition constants (360.43, 1.23 (mM), 1.54 (mM), 667.85, 845.86)ki(µM) RMSD values are (87.206, 81.106, 82.083, 71.635, 78.414)Å. Interaction of antitumor protein 4YJE shows the existence of many conventional bonds such as five conventional hydrogen bond interaction with amino acid (MET A: 438, MET A: 438, TYR A: 486, MET A: 438, MET A: 438) with different binding energies (-5.42, -5.32, -5.2, -4.95, -4.45)kcal/mol, inhibition constants (106.41, 126.67, 155.59, 234.91, 544.29)ki(µM) RMSD values are (49.944, 48.812, 33.732, 25.064, 25.158)Å.
4.6.2 Anticancer activity
Interaction of anticancerous protein 4YJ2 shows the existence of many conventional bonds such as one Alkyl bonds, two -alkyl bond and one carbon hydrogen bond interaction with amino acid (LEU A: 397, PRO A: 175, PRO A: 173, PRO A: 184, GLN A: 176) with different binding energies (-4.7, -4.6, -4.21, -4.57, -4.53)kcal/mol, inhibition constants (358.4, 426.72, 817.23, 447.01, 482.07)ki(µM) RMSD values are (80.983, 121.029, 111.228, 87.283, 94.627)Å.
4.6.3 Antiviral activity
Interaction of antiviral protein 4JZJ shows the existence of many conventional bonds such as three van der waals bonds and two - stackedbond interaction with amino acid (PHE A: 107, TRP A: 47, PHE A: 107, TRP A: 105, LEU A: 45) with different binding energies (-5.17, -4.95, -4.49, -4.23, -
4.2)kcal/mol, inhibition constants (163.56, 236.07, 514.73, 790.86, 838.87)ki(µM) RMSD values are (36.106, 36.427, 30.374, 38.123, 32.471)Å.
5. Conclusion
Structures of the title compounds were investigated using high-level quantum chemistry calculation. The optimized geometrical parameters and vibrational frequency assignment of the fundamental modes of title compounds have been obtained from DFT/B3LYP/6-31G and DFT/B3LYP/6-31G(d, p) level of calculation. The HOMO and LUMO analysis are used to determine the charge transfer within the molecule and the calculated HOMO and LUMO energies show the chemical activity of the molecule. The energy gap of the title molecule is E= 3.3557eV.
From the molecular electrostatic potential plot, it is evident that the negative charge covers the carbonyl group and the positive region is over the remaining groups and the more electronegativity in the carbonyl group makes it the most reactive part of the molecule. Weak interaction profile shows that the presence of Van der Waals interactions and steric effect are present in the molecule.
Molecular docking analysis reveals that the title molecule can act as a good inhibitor against the proteins 1JH5, 1OQE, 4YJ2 and 4JZJ.
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